STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437704Interferon regulatory factor 7-like. (432 aa)    
Predicted Functional Partners:
traf6
TNF receptor associated factor 6.
    
 0.932
ENSPRNP00000041757
TANK-binding kinase 1.
   
 0.932
irak4
Interleukin 1 receptor associated kinase 4.
    
 0.931
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.927
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 0.925
irak1
Interleukin 1 receptor associated kinase 1.
    
 0.921
LOC114452297
Interferon regulatory factor 3-like.
     
0.916
LOC114450351
TIR domain-containing adapter molecule 1-like.
    
 0.910
LOC114441944
Transmembrane emp24 domain-containing protein 7-like.
    
 0.909
LOC114432586
CREB-binding protein-like.
    
 0.905
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.