STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrasHRas proto-oncogene, GTPase. (189 aa)    
Predicted Functional Partners:
nf1
Neurofibromin 1.
    
 0.959
raf1
Raf-1 proto-oncogene, serine/threonine kinase.
  
 0.958
braf
B-Raf proto-oncogene, serine/threonine kinase.
  
 0.958
LOC114441977
Serine/threonine-protein kinase A-Raf-like.
  
 0.958
rasa1
RAS p21 protein activator 1.
   
 0.957
rassf5
Ras association domain family member 5.
    
 0.952
ralbp1
ralA binding protein 1.
    
 0.940
sos2
SOS Ras/Rho guanine nucleotide exchange factor 2.
   
 0.938
sos1
SOS Ras/Rac guanine nucleotide exchange factor 1.
   
 0.938
afdn
Afadin, adherens junction formation factor.
    
 0.937
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.