STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brpf1Bromodomain and PHD finger containing 1. (1295 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1 associated factor 6.
    
 0.956
ing5
Inhibitor of growth family member 5.
    
 0.938
LOC114440837
Histone acetyltransferase KAT6A-like.
    
 0.907
ing4
Inhibitor of growth family member 4.
    
 0.840
kat6b
Lysine acetyltransferase 6B.
    
 0.813
LOC114438775
Bromodomain and PHD finger-containing protein 3-like.
  
0.802
LOC114436107
Bromodomain and PHD finger-containing protein 3-like.
  
0.802
phf14
PHD finger protein 14.
   
 
0.796
kat8
Lysine acetyltransferase 8.
    
 0.792
kat5
Lysine acetyltransferase 5.
    
 0.792
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.