STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plac8Placenta associated 8. (104 aa)    
Predicted Functional Partners:
hsp90b1
Heat shock protein 90 beta family member 1.
   
 0.690
rpl9
Ribosomal protein L9.
    
  0.639
med1
Mediator complex subunit 1.
    
  0.639
med14
Mediator complex subunit 14.
    
  0.635
med17
Mediator complex subunit 17.
    
  0.634
pprc1
PPARG related coactivator 1.
    
  0.631
LOC114442290
Peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like.
    
  0.631
rbm22
RNA binding motif protein 22.
    
  0.631
ppargc1a
PPARG coactivator 1 alpha.
    
  0.631
LOC114441255
Hamartin-like.
    
 0.622
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.