STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000003540annotation not available (106 aa)    
Predicted Functional Partners:
mvd
Mevalonate diphosphate decarboxylase.
  
 0.903
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.901
ggps1
Geranylgeranyl diphosphate synthase 1.
    
 0.858
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 0.857
idi1
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.854
coq2
Coenzyme Q2, polyprenyltransferase.
  
 
 0.812
dhdds
Dehydrodolichyl diphosphate synthase subunit.
  
 
 0.806
ubiad1
UbiA prenyltransferase domain containing 1.
    
 0.784
trit1
tRNA isopentenyltransferase 1.
  
 
 0.783
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
 
 0.781
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.