STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000003544annotation not available (262 aa)    
Predicted Functional Partners:
ttc25
Tetratricopeptide repeat domain 25.
   
   0.710
ENSPRNP00000006527
Tektin 3.
   
   0.710
ccdc173
Coiled-coil domain containing 173.
    
   0.710
cfap52
Cilia and flagella associated protein 52.
    
   0.710
pacrg
Parkin coregulated.
    
   0.710
efhb
EF-hand domain family member B.
    
   0.710
efcab1
EF-hand calcium binding domain 1.
    
   0.710
ENSPRNP00000041929
annotation not available
    
   0.710
ENSPRNP00000044939
annotation not available
    
   0.710
ENSPRNP00000052391
annotation not available
    
   0.710
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.