STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dusp11Dual specificity phosphatase 11. (350 aa)    
Predicted Functional Partners:
polr2c
RNA polymerase II subunit C.
   
 0.864
rnmt
RNA guanine-7 methyltransferase.
   
 0.856
ENSPRNP00000002641
annotation not available
    
 0.848
LOC114453097
Crystallin J1A-like.
    
 0.848
ncor2
Nuclear receptor corepressor 2.
    
 0.848
ncor1
Nuclear receptor corepressor 1.
    
 0.848
LOC114449704
Crystallin J1A-like.
    
 0.848
ubxn7
UBX domain protein 7.
   
 0.838
ENSPRNP00000000699
annotation not available
    
 0.834
tnrc6a
Trinucleotide repeat containing adaptor 6A.
    
 0.834
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.