STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436160Protein kinase C-binding protein 1-like. (1223 aa)    
Predicted Functional Partners:
ints3
Integrator complex subunit 3.
    
   0.910
ints5
Integrator complex subunit 5.
    
   0.910
znf592
Zinc finger protein 592.
    
 
 0.765
znf532
Zinc finger protein 532.
    
 
 0.702
LOC114441636
Drebrin-like protein A.
    
   0.698
dbn1
Drebrin 1.
    
   0.698
dbnl
Drebrin like.
    
   0.698
LOC114439008
Testis-specific Y-encoded-like protein 1.
   
 
 0.636
LOC114442775
Integrator complex subunit 6-like.
    
   0.603
ints6
Integrator complex subunit 6.
    
   0.603
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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