STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114440490Protein shisa-9B-like. (378 aa)    
Predicted Functional Partners:
LOC114448533
Voltage-dependent calcium channel gamma-4 subunit-like.
     
 0.856
GRIN3A
Glutamate receptor ionotropic, NMDA 3A-like.
   
 
  0.815
ENSPRNP00000051160
Leucine-rich repeats and guanylate kinase domain containing.
     
 0.762
LOC114433732
Glutamate receptor 2-like.
     
 0.753
gria2
Glutamate ionotropic receptor AMPA type subunit 2.
     
 0.753
LOC114438800
Monoacylglycerol lipase ABHD6-like.
     
 0.752
abhd6
Abhydrolase domain containing 6.
     
 0.752
LOC114439025
Protein-serine O-palmitoleoyltransferase porcupine-like.
     
 0.750
ENSPRNP00000021178
annotation not available
  
  
 
0.750
porcn
Porcupine O-acyltransferase.
     
 0.750
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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