STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441022Rho-related BTB domain-containing protein 2-like. (745 aa)    
Predicted Functional Partners:
LOC114432947
Intersectin-2-like.
    
 0.997
ENSPRNP00000041654
annotation not available
    
 0.997
LOC114447695
Intersectin-1-like.
    
 0.951
LOC114447694
Intersectin-1-like.
    
 0.951
baiap2
BAR/IMD domain containing adaptor protein 2.
    
 0.895
LOC114439443
Brain-specific angiogenesis inhibitor 1-associated protein 2-like.
    
 0.895
iqgap2
IQ motif containing GTPase activating protein 2.
    
 0.892
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor 6.
   
 0.886
LOC114426016
Rho guanine nucleotide exchange factor 7-like.
   
 0.886
LOC114444967
T-lymphoma invasion and metastasis-inducing protein 1-like.
    
 0.874
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.