STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000003642annotation not available (107 aa)    
Predicted Functional Partners:
ENSPRNP00000000093
annotation not available
  
 
0.868
ENSPRNP00000008775
annotation not available
    
0.864
LOC114436628
Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog.
    
0.819
ENSPRNP00000023202
annotation not available
    
 0.819
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.815
ercc4
ERCC excision repair 4, endonuclease catalytic subunit.
    
  0.694
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.688
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.687
rpa1
Replication protein A1.
    
 0.672
RPA1
Replication protein A 70 kDa DNA-binding subunit-like.
    
 0.672
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.