STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem201Transmembrane protein 201. (658 aa)    
Predicted Functional Partners:
emd
Emerin.
    
 
 0.589
LOC114442625
SUN domain-containing protein 2-like.
    
 
 0.553
LOC114451898
SUN domain-containing protein 1-like.
    
 
 0.553
LOC114440189
SUN domain-containing protein 1-like.
    
 
 0.553
ENSPRNP00000055410
annotation not available
    
 
 0.553
sbk1
SH3 domain binding kinase 1.
      
 0.537
sla2
Src like adaptor 2.
      
 0.515
coq4
Coenzyme Q4.
      
 0.510
eapp
E2F associated phosphoprotein.
      
 0.497
thyn1
Thymocyte nuclear protein 1.
      
 0.479
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.