STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114446709Magnesium transporter NIPA2-like. (411 aa)    
Predicted Functional Partners:
uxs1
UDP-glucuronate decarboxylase 1.
   
 
 0.683
alg5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
   
 
  0.578
nsdhl
NAD(P) dependent steroid dehydrogenase-like.
     
 0.529
LOC114426379
Uncharacterized LOC114426379.
   
  
 0.520
pgm3
Phosphoglucomutase 3.
   
 
  0.505
LOC114431691
L-threonine 3-dehydrogenase, mitochondrial-like.
     
 0.493
mat2b
Methionine adenosyltransferase 2B.
     
 0.493
LOC114433297
40S ribosomal protein S17-like.
     
 0.493
LOC114452531
40S ribosomal protein S17.
     
 0.493
LOC114441404
Flavin reductase (NADPH)-like.
     
 0.493
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.