STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432440Upstream stimulatory factor 2-like. (327 aa)    
Predicted Functional Partners:
usf1
Upstream transcription factor 1.
  
 
0.955
LOC114427420
Protein max-like.
    
 0.742
max
MYC associated factor X.
    
0.742
sp1
Sp1 transcription factor.
    
 0.709
LOC114437792
Histone acetyltransferase p300-like.
    
 0.699
LOC114432586
CREB-binding protein-like.
    
 0.659
LOC114439810
CREB-binding protein-like.
    
 0.659
LOC114435842
Nuclear receptor coactivator 3-like.
    
 0.614
LOC114449725
Nuclear receptor coactivator 2-like.
    
 0.614
LOC114438266
Nuclear receptor coactivator 3-like.
    
 0.614
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.