STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114443266Transcription factor TFIIIB component B'' homolog. (2125 aa)    
Predicted Functional Partners:
brf2
BRF2 RNA polymerase III transcription initiation factor subunit.
    
 0.993
polr3f
RNA polymerase III subunit F.
    
 0.991
LOC114427176
Transcription factor IIIB 90 kDa subunit-like.
    
 0.991
LOC114428428
Transcription factor IIIB 90 kDa subunit-like.
    
 0.991
polr3e
RNA polymerase III subunit E.
    
 0.991
polr3a
RNA polymerase III subunit A.
   
 0.990
polr3b
RNA polymerase III subunit B.
   
 0.985
crcp
CGRP receptor component.
    
 0.985
polr3c
RNA polymerase III subunit C.
    
 0.985
LOC114427749
TATA-box-binding protein-like.
    
 0.984
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.