STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRAG1Inactive tyrosine-protein kinase PRAG1-like. (1322 aa)    
Predicted Functional Partners:
LOC114432947
Intersectin-2-like.
     
 0.665
ENSPRNP00000041654
annotation not available
     
 0.665
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.584
LOC114447695
Intersectin-1-like.
     
 0.576
LOC114447694
Intersectin-1-like.
     
 0.576
trrap
Transformation/transcription domain associated protein.
      
 0.532
nck1
NCK adaptor protein 1.
    
  0.501
nck2
NCK adaptor protein 2.
    
  0.501
setbp1
SET binding protein 1.
  
    0.492
usp9x
Ubiquitin specific peptidase 9 X-linked.
   
 
  0.458
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.