STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgm1EF-hand calcium binding domain 7. (629 aa)    
Predicted Functional Partners:
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.980
LOC114451780
Glucose-6-phosphate isomerase-like.
  
 0.978
gpi
Glucose-6-phosphate isomerase.
  
 0.978
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.977
pygl
Glycogen phosphorylase L.
  
 
 0.972
LOC114445932
Glycogen phosphorylase, muscle form.
  
 
 0.972
pygm
Glycogen phosphorylase, muscle associated.
  
 
 0.972
taldo1
Transaldolase 1.
  
 0.950
ugp2
UDP-glucose pyrophosphorylase 2.
 
 
 0.945
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
   
 
 0.944
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.