STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgf10Fibroblast growth factor 10. (249 aa)    
Predicted Functional Partners:
fgfr2
Fibroblast growth factor receptor 2.
    
 0.933
LOC114441904
Fibroblast growth factor receptor 1-A-like.
    
 0.923
LOC114445756
Fibroblast growth factor receptor 4-like.
    
 0.917
fgfr3
Fibroblast growth factor receptor 3.
    
 0.917
ENSPRNP00000045417
annotation not available
    
 0.913
pdgfra
Platelet derived growth factor receptor alpha.
   
 0.898
flt3
Fms related tyrosine kinase 3.
   
 0.898
pdgfrb
Platelet derived growth factor receptor beta.
   
 0.896
flt1
Fms related tyrosine kinase 1.
   
 0.893
LOC114446732
Macrophage colony-stimulating factor 1 receptor 2-like.
    
 0.886
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.