STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114442913Kelch-like protein 4. (732 aa)    
Predicted Functional Partners:
rbx1
Ring-box 1.
    
 0.856
klhl7
Kelch like family member 7.
  
 
 
0.829
klhl21
Kelch like family member 21.
    
 
0.822
kbtbd8
Kelch repeat and BTB domain containing 8.
    
 
0.809
arih1
Ariadne RBR E3 ubiquitin protein ligase 1.
   
  0.796
klhl22
Kelch like family member 22.
  
 
 
0.793
GAN
Gigaxonin.
  
  
 
0.792
bbs1
Bardet-Biedl syndrome 1.
    
 0.783
lztr1
Leucine zipper like transcription regulator 1.
    
 
0.782
sqstm1
Sequestosome 1.
    
 0.778
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.