STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xaf1XIAP associated factor 1. (263 aa)    
Predicted Functional Partners:
LOC114434797
Interferon-induced protein 44-like.
   
  
 0.922
LOC114442497
E3 ubiquitin-protein ligase XIAP-like.
    
 0.893
tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.849
traf7
TNF receptor associated factor 7.
   
 0.838
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.834
ifi35
Interferon induced protein 35.
   
 
 0.772
epsti1
Epithelial stromal interaction 1.
   
  
 0.758
ifih1
Interferon induced with helicase C domain 1.
   
 0.747
LOC114453829
Protein mono-ADP-ribosyltransferase PARP14-like.
   
  
 0.741
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.702
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.