STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc150Coiled-coil domain containing 150. (753 aa)    
Predicted Functional Partners:
ccdc77
Coiled-coil domain containing 77.
   
  
 0.548
LOC114439012
Nuclear envelope integral membrane protein 1-like.
      
 0.537
ENSPRNP00000018593
annotation not available
      
 0.537
slc49a4
Solute carrier family 49 member 4.
      
 0.535
ccdc34
Coiled-coil domain containing 34.
      
 0.535
gstcd
Glutathione S-transferase C-terminal domain containing.
      
 0.535
carnmt1
Carnosine N-methyltransferase 1.
      
 0.534
cep85
Centrosomal protein 85.
      
 0.534
iqck
IQ motif containing K.
      
 0.534
donson
Downstream neighbor of SON.
      
 0.530
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.