STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114444138GDNF family receptor alpha-2-like. (482 aa)    
Predicted Functional Partners:
LOC114450000
Neurturin-like.
    
 0.987
ret
Ret proto-oncogene.
    
 0.987
gdnf
Glial cell derived neurotrophic factor.
    
 0.934
ENSPRNP00000046323
annotation not available
    
 0.868
ENSPRNP00000000963
annotation not available
     
 0.825
stil
STIL centriolar assembly protein.
    
 0.781
LOC114445756
Fibroblast growth factor receptor 4-like.
    
 0.781
FGFRL1
Fibroblast growth factor receptor-like 1.
    
 0.781
FGFRL1-2
Fibroblast growth factor receptor-like 1.
    
 0.781
fgfr3
Fibroblast growth factor receptor 3.
    
 0.781
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.