STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhddsDehydrodolichyl diphosphate synthase subunit. (345 aa)    
Predicted Functional Partners:
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
   
 0.999
mvd
Mevalonate diphosphate decarboxylase.
   
 0.929
idi1
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.925
ggps1
Geranylgeranyl diphosphate synthase 1.
  
 
 0.920
fnta
Farnesyltransferase, CAAX box, alpha.
     
 0.920
pdss1
Decaprenyl diphosphate synthase subunit 1.
  
 
 0.917
coq2
Coenzyme Q2, polyprenyltransferase.
    
 0.913
mrrf
Mitochondrial ribosome recycling factor.
  
  
 0.911
LOC114429207
Protein farnesyltransferase subunit beta-like.
     
 0.908
fdps
Farnesyl diphosphate synthase.
  
 
 0.908
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.