STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
krr1KRR1 small subunit processome component homolog. (381 aa)    
Predicted Functional Partners:
wdr46
WD repeat domain 46.
   
 0.996
utp11
UTP11 small subunit processome component.
   
 0.996
LOC114452526
Ribosome biogenesis protein BMS1 homolog.
   
 0.996
bysl
Bystin like.
   
 0.996
UTP18
UTP18 small subunit processome component.
   
 0.996
ngdn
Neuroguidin.
   
 0.996
nop58
NOP58 ribonucleoprotein.
   
 0.995
nop14
NOP14 nucleolar protein.
   
 0.995
utp3
UTP3 small subunit processome component.
   
 0.995
ltv1
LTV1 ribosome biogenesis factor.
   
 0.995
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.