STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaxPhosphorylated adaptor for RNA export. (404 aa)    
Predicted Functional Partners:
ncbp2
Nuclear cap binding protein subunit 2.
   
 0.981
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.956
LOC114431361
Serrate RNA effector molecule homolog.
   
 0.867
srrt
Serrate, RNA effector molecule.
   
 0.867
ran
RAN, member RAS oncogene family.
    
 0.858
adgrd1
Adhesion G protein-coupled receptor D1.
    
 0.848
pcf11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.770
LOC114427416
Adhesion G protein-coupled receptor B1-like.
    
  0.713
adgrb1
Adhesion G protein-coupled receptor B1.
    
  0.713
adgrb2
Adhesion G protein-coupled receptor B2.
    
  0.713
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.