STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekha8Pleckstrin homology domain containing A8. (554 aa)    
Predicted Functional Partners:
arf3
ADP ribosylation factor 3.
   
 0.625
ARL6
ADP-ribosylation factor-like protein 6.
   
 0.625
LOC114439520
ADP-ribosylation factor 1-like.
   
 0.625
LOC114426023
ADP-ribosylation factor-like protein 6.
   
 0.625
arf5
ADP ribosylation factor 5.
   
 0.625
LOC114451560
ADP-ribosylation factor 4-like.
   
 0.625
LOC114451388
ADP-ribosylation factor 1.
   
 0.625
LOC114436308
ADP-ribosylation factor 5-like.
   
 0.625
LOC114436406
ADP-ribosylation factor 3.
   
 0.625
arl5a
ADP ribosylation factor like GTPase 5A.
   
 0.578
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.