STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437398NAD-dependent protein deacetylase sirtuin-3-like. (435 aa)    
Predicted Functional Partners:
sirt4
Sirtuin 4.
  
 
0.912
sirt1
Sirtuin 1.
  
 
0.897
nadsyn1
NAD synthetase 1.
    
 0.885
nudt12
Nudix hydrolase 12.
   
 0.881
nampt
Nicotinamide phosphoribosyltransferase.
     
 0.871
nadk
NAD kinase.
  
 
 0.871
LOC114449329
NAD kinase-like.
  
 
 0.871
nmnat1
Nicotinamide nucleotide adenylyltransferase 1.
   
 0.869
nmnat3
Nicotinamide nucleotide adenylyltransferase 3.
   
 0.869
sirt6
Sirtuin 6.
  
  
0.869
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.