STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114440990Septin-2. (396 aa)    
Predicted Functional Partners:
septin10
Septin 10.
  
0.958
LOC114448247
Septin-7.
  
0.944
LOC114447989
Septin-7.
  
0.944
LOC114451787
Septin-7-like.
  
0.944
LOC114445712
septin-8-A.
  
0.924
septin6
Septin 6.
  
0.923
LOC114442190
septin-8-A-like.
  
0.922
TMEM250
Transmembrane protein 250.
    
 0.907
LOC114432322
Septin-9-like.
  
0.848
septin3
Septin 3.
  
0.846
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.