STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441292Tumor necrosis factor receptor superfamily member 10B-like. (377 aa)    
Predicted Functional Partners:
LOC114433164
FAS-associated death domain protein-like.
    
 0.900
tradd
TNFRSF1A associated via death domain.
    
 0.896
LOC114443551
Tumor necrosis factor receptor superfamily member 10B-like.
  
 
0.881
ripk1
Receptor interacting serine/threonine kinase 1.
    
 0.879
LOC114453006
Tumor necrosis factor ligand superfamily member 10-like.
     
 0.846
TNFSF10
TNF superfamily member 10.
     
 0.846
LOC114426757
Tumor necrosis factor ligand superfamily member 11-like.
     
 0.844
LOC114447785
Tumor necrosis factor receptor superfamily member 6-like.
    
0.775
LOC114434668
Tumor necrosis factor ligand superfamily member 6-like.
    
 0.756
LOC114436557
Tumor necrosis factor ligand superfamily member 10-like.
     
 0.756
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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