STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35b1Solute carrier family 35 member B1. (343 aa)    
Predicted Functional Partners:
tmem208
Transmembrane protein 208.
   
 
 0.600
dhdds
Dehydrodolichyl diphosphate synthase subunit.
  
 
 0.586
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
 
 0.584
gart
annotation not available
  
  
 0.569
mydgf
Myeloid derived growth factor.
   
    0.569
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
  
  
 0.564
derl1
Derlin 1.
   
  
 0.549
xpnpep1
X-prolyl aminopeptidase 1.
  
 
 0.544
xpnpep2
X-prolyl aminopeptidase 2.
  
 
 0.544
LOC114452812
FAST kinase domain-containing protein 3, mitochondrial-like.
    
 0.542
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.