STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000004457Si:dkey-83h2.3. (221 aa)    
Predicted Functional Partners:
tat
Tyrosine aminotransferase.
   
  
 0.487
LOC114449587
Vitamin K-dependent protein C-like.
   
    0.485
ENSPRNP00000049341
annotation not available
  
     0.484
serpinf2
Serpin family F member 2.
   
  
 0.473
tm4sf5
Transmembrane 4 L six family member 5.
   
   
0.430
aldh8a1
Aldehyde dehydrogenase 8 family member A1.
   
    0.428
hal
Histidine ammonia-lyase.
   
    0.426
LOC114439969
Nucleoside diphosphate kinase, mitochondrial-like.
   
    0.422
a1cf
APOBEC1 complementation factor.
   
    0.422
phf3
PHD finger protein 3.
  
     0.415
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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