STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRMT8Protein arginine methyltransferase 8. (414 aa)    
Predicted Functional Partners:
prmt5
Protein arginine methyltransferase 5.
   
 0.896
rps2
Ribosomal protein S2.
   
 0.893
WDR77
WD repeat domain 77.
  
 0.852
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.848
clns1a
Chloride nucleotide-sensitive channel 1A.
   
 0.843
snrpd1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.827
fbl
Fibrillarin.
   
 
 0.826
LOC114431564
Forkhead box protein O6-like.
    
  0.819
tsr1
TSR1 ribosome maturation factor.
   
  0.807
LOC114437792
Histone acetyltransferase p300-like.
    
 0.803
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.