STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fblim1Filamin binding LIM protein 1. (392 aa)    
Predicted Functional Partners:
LOC114451397
filamin-C-like.
   
 0.906
LOC114426512
filamin-C-like.
   
 0.906
FLNB
Filamin B.
   
 0.906
LOC114438991
filamin-A-like.
   
 0.906
haus3
HAUS augmin like complex subunit 3.
   
 0.881
haus1
HAUS augmin like complex subunit 1.
   
 0.881
haus8
HAUS augmin like complex subunit 8.
    
 0.869
haus5
HAUS augmin like complex subunit 5.
   
 0.810
rbm42
RNA binding motif protein 42.
   
 0.810
fermt2
Fermitin family member 2.
    
 0.798
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.