STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan9Tetraspanin 9. (342 aa)    
Predicted Functional Partners:
LOC114435954
Macrophage-stimulating protein receptor-like.
    
  0.672
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.672
mst1r
Macrophage stimulating 1 receptor.
    
  0.672
cd63
CD63 molecule.
     
0.654
scarb1
Scavenger receptor class B member 1.
     
 0.580
mpl
MPL proto-oncogene, thrombopoietin receptor.
   
 
  0.564
LOC114443317
Lysosome membrane protein 2-like.
     
 0.561
scarb2
Scavenger receptor class B member 2.
     
 0.561
LOC114441029
Lysosome membrane protein 2-like.
     
 0.561
cd36
CD36 molecule.
     
 0.561
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.