STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436346Msx2-interacting protein-like. (3230 aa)    
Predicted Functional Partners:
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.906
LOC114433326
Recombining binding protein suppressor of hairless-like.
    
 
 0.906
wtap
WT1 associated protein.
    
 0.879
mettl3
Methyltransferase like 3.
    
 0.853
mettl14
Methyltransferase like 14.
    
 0.851
zc3h13
Zinc finger CCCH-type containing 13.
   
 0.795
cbll1
Cbl proto-oncogene like 1.
     
 0.790
thoc2
THO complex 2.
   
 0.771
LOC114450611
Recombining binding protein suppressor of hairless-like protein.
    
 
 0.768
LOC114429222
Cleavage and polyadenylation specificity factor subunit 6-like.
    
 0.742
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.