STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441025COBW domain-containing protein 1-like. (366 aa)    
Predicted Functional Partners:
metap1
Methionyl aminopeptidase 1.
   
 
 0.914
RPS29
Ribosomal protein S29.
  
 
 0.878
rsad1
Radical S-adenosyl methionine domain containing 1.
  
 
 0.877
mrps14
Mitochondrial ribosomal protein S14.
  
 
 0.877
ENSPRNP00000046534
Mitochondrial ribosomal protein L33.
  
  
 0.839
ENSPRNP00000019726
annotation not available
  
  
 0.716
LOC114438164
Proliferation-associated protein 2G4-like.
   
 
 0.688
vezt
Vezatin, adherens junctions transmembrane protein.
   
 
 0.688
metap2
Methionyl aminopeptidase 2.
   
 
 0.688
LOC114451604
Methionine aminopeptidase 2-like.
   
 
 0.688
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.