STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvblilvB acetolactate synthase like. (629 aa)    
Predicted Functional Partners:
LOC114439770
Branched-chain-amino-acid aminotransferase, cytosolic-like.
  
 0.939
bcat1
Branched chain amino acid transaminase 1.
  
 0.939
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 
 0.926
hmgcll1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
  
 
 0.921
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
  
 
 0.921
cs
Citrate synthase.
    
 0.919
adhfe1
Alcohol dehydrogenase iron containing 1.
    
 0.918
pc
Pyruvate carboxylase.
     
 0.911
ENSPRNP00000003637
annotation not available
  
 
 0.909
LOC114442241
Malate synthase-like.
    
 0.897
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.