STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000004659General transcription factor IIA, 2. (111 aa)    
Predicted Functional Partners:
gtf2a1
General transcription factor IIA subunit 1.
    
 0.998
gtf2b
General transcription factor IIB.
   
 0.998
gtf2f1
General transcription factor IIF subunit 1.
    
 0.997
gtf2e1
General transcription factor IIE subunit 1.
    
 0.997
gtf2e2
General transcription factor IIE subunit 2.
   
 0.997
gtf2h3
General transcription factor IIH subunit 3.
    
 0.996
ENSPRNP00000040698
General transcription factor IIA, 1-like.
    
 0.996
ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.995
taf11
TATA-box binding protein associated factor 11.
    
 0.995
gtf2h4
General transcription factor IIH subunit 4.
    
  0.994
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.