STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx29DExH-box helicase 29. (1384 aa)    
Predicted Functional Partners:
LOC114432947
Intersectin-2-like.
    
  0.992
ENSPRNP00000041654
annotation not available
    
  0.992
LOC114452509
Eukaryotic translation initiation factor 3 subunit C.
   
 0.956
rps3a
Ribosomal protein S3A.
    
  0.955
rps8
Ribosomal protein S8.
    
  0.955
rps18
Ribosomal protein S18.
   
 0.954
rps11
Ribosomal protein S11.
   
  0.954
eif3b
Eukaryotic translation initiation factor 3 subunit B.
   
 0.954
rps7
Ribosomal protein S7.
    
  0.953
rps28
Ribosomal protein S28.
   
  0.952
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.