STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114446712Serpin H1-like. (410 aa)    
Predicted Functional Partners:
ENSPRNP00000006822
annotation not available
    
 0.713
ppib
Peptidylprolyl isomerase B.
  
 0.705
ppic
Peptidylprolyl isomerase C.
  
 0.685
ENSPRNP00000035948
annotation not available
    
  0.675
ENSPRNP00000005691
annotation not available
    
 0.666
col6a1
Collagen type VI alpha 1 chain.
   
 0.657
HABP2
Hyaluronan binding protein 2.
   
 0.648
LOC114446857
Hyaluronan-binding protein 2-like.
   
 0.648
emid1
EMI domain containing 1.
    
 0.635
ENSPRNP00000000563
annotation not available
    
 0.629
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.