STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436367Rab GDP dissociation inhibitor beta-like. (446 aa)    
Predicted Functional Partners:
rabggtb
Rab geranylgeranyltransferase subunit beta.
   
 0.914
RAB1A
Ras-related protein ORAB-1.
   
 0.901
LOC114444633
Ras-related protein ORAB-1-like.
   
 0.901
LOC114446841
Ras-related protein ORAB-1-like.
   
 0.901
LOC114450598
Ras-related protein Rab-1A-like.
   
 0.901
rab41
RAB41, member RAS oncogene family.
   
 0.898
rab6a
RAB6A, member RAS oncogene family.
   
 0.898
LOC114435037
Ras-related protein Rab-6B.
   
 0.898
LOC114449681
Ras-related protein Rab-6B-like.
   
 0.898
LOC114432358
Ras-related protein Rab-9A-like.
    
 0.894
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.