STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114451847Serine/threonine-protein kinase LMTK1-like. (1583 aa)    
Predicted Functional Partners:
il34
Interleukin 34.
   
 0.747
LOC114438616
Uncharacterized LOC114438616.
   
 0.733
kitlg
KIT ligand.
    
 0.717
pgf
Placental growth factor.
    
 0.699
plcg2
Phospholipase C gamma 2.
    
 0.685
plcg1
Phospholipase C gamma 1.
    
 0.685
grb2
Growth factor receptor bound protein 2.
    
 0.682
rpl13a
Ribosomal protein L13a.
    
 0.669
LOC114438257
Transcription factor SPT20 homolog.
    
 0.666
LOC114439371
Uncharacterized LOC114439371.
    
 0.666
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.