STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114450979Protein TASOR-like. (2132 aa)    
Predicted Functional Partners:
LOC114451352
Periphilin-1-like.
    
 
 0.922
LOC114438932
Periphilin-1-like.
    
 
 0.817
ippk
Inositol-pentakisphosphate 2-kinase.
     
 0.770
mphosph8
M-phase phosphoprotein 8.
  
 
 0.765
ppip5k1
Diphosphoinositol pentakisphosphate kinase 1.
    
 0.717
LOC114452630
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like.
    
 0.717
synj1
Synaptojanin 1.
     
 0.665
LOC114447815
Multiple inositol polyphosphate phosphatase 1-like.
    
 0.630
ENSPRNP00000033542
annotation not available
    
 0.630
minpp1
Multiple inositol-polyphosphate phosphatase 1.
    
 0.630
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.