STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scrn3Secernin 3. (418 aa)    
Predicted Functional Partners:
arpc3
Actin related protein 2/3 complex subunit 3.
   
 0.980
ARPC4
Actin-related protein 2/3 complex subunit 4-like.
   
 0.944
LOC114435426
Actin-related protein 2/3 complex subunit 4.
   
 0.944
LOC114450285
Actin-related protein 2/3 complex subunit 5-like.
   
 0.920
arpc5
Actin related protein 2/3 complex subunit 5.
   
 0.920
LOC114437522
Actin-related protein 2/3 complex subunit 1B-B-like.
   
 0.918
LOC114439507
Actin-related protein 2/3 complex subunit 1A-A-like.
   
 0.918
nckipsd
NCK interacting protein with SH3 domain.
    
 0.911
LOC114450854
Shootin-1-like.
    
 0.834
LOC114446145
Neural Wiskott-Aldrich syndrome protein-like.
    
 0.834
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.