STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000004901annotation not available (251 aa)    
Predicted Functional Partners:
bap1
BRCA1 associated protein 1.
    
 0.910
skp1
S-phase kinase associated protein 1.
    
  0.808
sirt1
Sirtuin 1.
    
  0.799
jarid2
Jumonji and AT-rich interaction domain containing 2.
    
 0.798
trim37
Tripartite motif containing 37.
    
  0.764
asxl2
ASXL transcriptional regulator 2.
    
 0.756
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.714
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase.
    
 0.691
LOC114439304
Polycomb protein suz12-B-like.
    
 0.683
suz12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.683
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.