STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000004910annotation not available (104 aa)    
Predicted Functional Partners:
prdx5
Peroxiredoxin 5.
   
 0.981
mrps10
Mitochondrial ribosomal protein S10.
  
 0.978
RPS20
Ribosomal protein S20.
  
 0.977
mrps12
Mitochondrial ribosomal protein S12.
  
 0.975
WDR63
WD repeat domain 63.
    
 0.974
dnai2
Dynein axonemal intermediate chain 2.
    
 0.974
dnai1
Dynein axonemal intermediate chain 1.
    
 0.974
LOC114426920
Cytoplasmic dynein 1 intermediate chain 2-like.
    
 0.974
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
    
 0.974
LOC114449915
Cytoplasmic dynein 1 intermediate chain 2-like.
    
 0.974
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.