STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114453521Armadillo repeat-containing protein 1-like. (276 aa)    
Predicted Functional Partners:
mtfr1l
Mitochondrial fission regulator 1 like.
    
 
 0.609
dnajc11
DnaJ heat shock protein family (Hsp40) member C11.
    
 
 0.513
LOC114435636
dnaJ homolog subfamily C member 11-like.
    
 
 0.492
mrps25
Mitochondrial ribosomal protein S25.
   
    0.476
abitram
Actin binding transcription modulator.
      
 0.471
ARMC6
Armadillo repeat containing 6.
      
 0.410
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.