STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpt1Tumor protein, translationally-controlled 1. (170 aa)    
Predicted Functional Partners:
LOC114442728
Elongation factor 1-gamma.
   
 
 0.994
eef1b2
Eukaryotic translation elongation factor 1 beta 2.
  
 
 0.990
rpl9
Ribosomal protein L9.
   
 
 0.977
rplp0
Ribosomal protein lateral stalk subunit P0.
   
 
 0.977
rack1
Receptor for activated C kinase 1.
   
 
 0.976
rps2
Ribosomal protein S2.
   
 
 0.976
rps8
Ribosomal protein S8.
   
 
 0.972
rpl30
Ribosomal protein L30.
   
 
 0.969
rpl14
Ribosomal protein L14.
   
 
 0.968
rpl31
Ribosomal protein L31.
   
 
 0.967
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.