STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
piguPhosphatidylinositol glycan anchor biosynthesis class U. (435 aa)    
Predicted Functional Partners:
pigs
Phosphatidylinositol glycan anchor biosynthesis class S.
   
 0.998
pigt
Phosphatidylinositol glycan anchor biosynthesis class T.
   
 0.998
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.998
pigk
Phosphatidylinositol glycan anchor biosynthesis class K.
    
 0.998
pigo
Phosphatidylinositol glycan anchor biosynthesis class O.
   
 0.937
pgap1
post-GPI attachment to proteins inositol deacylase 1.
    
 0.906
pigf
Phosphatidylinositol glycan anchor biosynthesis class F.
     
 0.853
LOC114439275
N-acetylmuramoyl-L-alanine amidase-like.
     
 0.779
LOC114444691
Peptidoglycan-recognition protein SC2-like.
     
 0.779
alg3
ALG3 alpha-1,3- mannosyltransferase.
    
  0.758
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.