STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000005017Si:ch211-231m23.4. (320 aa)    
Predicted Functional Partners:
LOC114436215
Ghrelin-like.
     
 0.853
npy
Neuropeptide Y.
     
 0.848
trio
Trio Rho guanine nucleotide exchange factor.
   
  0.658
LOC114448027
Triple functional domain protein-like.
   
  0.658
C1QC
Complement C1q subcomponent subunit C-like.
   
  0.638
LOC114435462
Guanine nucleotide-binding protein G(t) subunit alpha-1.
    
 0.633
LOC114437950
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
    
 0.633
LOC114433192
Guanine nucleotide-binding protein G(o) subunit alpha-like.
    
  0.614
LOC114437155
Guanine nucleotide-binding protein G(i) subunit alpha-1.
    
  0.614
LOC114437885
Guanine nucleotide-binding protein G(o) subunit alpha.
    
  0.614
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.